Nah. Sorry for the confusion on this.
What I'd do is use my cooking vessel to collect it, and then run it through the filter or boil it depending on what I wanted to do with it. My thought is that way I don't ruin a blue water container with filling it. Any time I'll be taking water out of my cooking vessel for consumption, I'll have boiled that water, killing anything that might be left over from the collection period (which means that the collection vessel is self-sterilizing).
That way, I don't have to worry about whether or not the collection vessel is contaminated for further drinking--and I don't have to worry about possible cross-contamination from my blue water line coming loose at some point and swinging under the grey water coming off of the roof (I use an inline filter set up that can be used as a gravity filter), or splash back from the collection getting on my mouthpiece. Or disassembling my filter system to avoid the above.
I hope the clears it up a bit. If not, I'll try again...I'm not always the clearest at conveying things...
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